Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYNEKILDHYENPRNVGSLDKNDPSVGTGLVGAPSCGDVMKLQIKVNDKGVIEDAKFKTFGCGSAIASSSLLTEMIKGKTIEDVTKIKNTQIVEEL-SLPPVKVHCSVLAEDAIKAAIHDYQSKHSKNES
4EB5 Chain:C ((2-123))
--YSDKVFDHFQNPRNVGKIEDAD---GVGTVGNPVCGDLMTIYIKVKDN-RIEDIKFQTFGCAAAIATSSMATEMAKGKTIEEALKITRDAVAEALGGLPKQKMHCSNLAADALRRAIVDYFRKNGKIDK
General information:
TITO was launched using:
RESULT:
Template:
4EB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45806 for 1017 contacts (-45.0/contact) +
2D Compatibility (PS) -13002 + (NN) -5778 + (LL) 32
1D Compatibility (HY) -9200 + (ID) 3350
Total energy: -77104.0 ( -75.82 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_4EB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EB5-query.scw
PDB file :
Tito_Scwrl_4EB5.pdb
: