Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNYFALFKIEPAFNISLDELEKKYIELSK---TDINERQSQNMEN--------INKAYQVLKSPLKRAEHLLNLFGVRSQEDQHNFEILNESMEIREYLLDCNNLQLASGMIDEKIKDCIKNLTNNFAVKNFDEAAMQVLRLKYLYKSFEEIKNETNSNF
3BVO Chain:A ((42-119))
-TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEIPERTDYEMDRQFLIEIMEINEKLAEAESEAAMKEIESIVKAKQKEFTDNVSSAFEQDDFEEAKEILTKMRYFSNIEEKIKL
General information:
TITO was launched using:
RESULT:
Template:
3BVO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14110 for 368 contacts (-38.3/contact) +
2D Compatibility (PS) -7277 + (NN) -5276 + (LL) 208
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -33105.0 ( -89.96 by residue)
QMean score : 0.689
(partial model without unconserved sides chains):
PDB file :
Tito_3BVO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BVO-query.scw
PDB file :
Tito_Scwrl_3BVO.pdb
: