Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLSQEANSNSVEAQKLQQVDNITPSSEGLLQQMQSLEKRIKSLEVTNRVILGLFIGTLATAMTVGAGFAIAAAPIIAGSIVGGVLATVALVALGATVYRCRAQVEAGFRYAAEKTIKGVKYIGEKIKDSAIHTKDSVKEAVSSIGQVAREETSSVLKTMGHKLSGLGASMSNLDSIPYSIGLQDSMVVSKTEEKTKNFNSIKEMFVKEVFEDKAIDSSVLVKKIFSELKGKVLEKAYS---VDGQQGFKKDQLINQLGQQADFVSKLSSKKLQNLLAQGDNNLYEIFSEHHDEIKRIVKEHKTEHNFSESLNRMAKRHDENRKDSTQSSLPRSNSLSSVRTDSTVNSVAELLNSEGHRKVRSSSKLLRWLPWNKVSKAPEEAANVKYQVLPESDILAREIGKRTFYGIPVPAEGVDKTVTVNPNLFRSNSPNSLYGSPVLTPAVLLQVPKSLSLGSLSSDSGMDSGPSTLEKQSLSPEDLAKARASLKNTGSLGKLVEQQPSASPPAVEDVSEDLEEDFKKDKPATTFSQLKAEKSGAEVSYL |
| 4X61 Chain:A ((440-490)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVSELLGSFADNELSPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNEVRACREKDRDPEAQFEMPYVVRLHNFHQLSAPQPCFTFSHPNRDPMIDNNRYCTLEFPVEVNTVLHGFAGYFETVLYQDITLSIRPETHSPGMFSWFPILFPIKQPITVREGQTICVRFWRCSNSKKVWYEWAVTAPVCSAIHNPTGRSYTIGL------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X61.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4830 for 197 contacts (24.5/contact) +
2D Compatibility (PS) -4556 + (NN) 2233 + (LL) 24240
1D Compatibility (HY) -3600 + (ID) 950
Total energy: 22197.0 ( 112.68 by residue)
QMean score : 0.141
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