Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEEINIMNDFTNNNNSSDSSIFQGKICPEDLNKAQEVNELKGVTEELFKKIELQKQEYEGLGKEASSEIQGMFTPVMLGDDNPTDGGIVEETLAELGKFFQSLLSEFEIELDPKTYEMINGKREKNWLAAIIKFLHDKLKELVEKVFSCDLSFDERVDKEIKELEEKLLSGGFSKEEEVAVLGKLEALRELKLKLQMAVAGWIVAMVAEIFAVELVVAAEGTGTAKEEDKKAEKTSSKKEVEVCKEIGIKVGED-EKLRI-LPISLFLIPARGQSNRLIIPPLKPEEQNLLRDSLKKMI--HGPEHDVNREN-CEVKETKVEENKQVEELIAVRPTASGQPATNSMELKDTQRDNSDWKEMKGQGKNNTCKKTLRQSNRGFVSNDNTSRRPAQSSVFSRETPEQLAQEYVFNGEASTQHATKSVSNRGSSGQPMKGSVVGSEYDFSTWSNAEYEAQQSSVNNAQPTSECNDVKVNNHVNSMGRAQGEAQSR |
4DBR Chain:A ((362-444)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNKSTQALEYCAEL---LGLDQDDLRVSLTTR------------VIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6053 for 283 contacts (-21.4/contact) +
2D Compatibility (PS) -6990 + (NN) -2778 + (LL) 18948
1D Compatibility (HY) -3600 + (ID) 1450
Total energy: -1923.0 ( -6.80 by residue)
QMean score : 0.493
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