Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPISLPKVRGIYRYSVLMSKITWLNVGGQADILFKPRDIEDLIYLIKNTKLPISVIGATSNMIVRDSGIRGITVKLGKEFAYIKYKSNNSIIAGGAALLSNLAYFAGEQQVSGLEFLVGIPGTIGGGIEMNAGAYGSDVASVVQSIKAVNLSDGNLYEFSSKEMGYVYRGHSLKGQWIFIEAEFKGVSSGHEVILHRLKEIINKKNKSQPVRGKTAGCIFKNPRAYQAWKLIDGSGCRGLNNGGAKISKKHCNFLLNYNNATASDLENLGNKVRNTVKDKFNIELEWEIRVLGSH |
| 2GQU Chain:A ((9-255)) | ---------------VLLKDYTTLGVGGPAELW----TVETREELKRATEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTYDLKG----WVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFH--DGAFHVYCPEELGFGYRKSHLPPGGIVTRVRLKLKERPKEEILRRMAEV-DRARKGQPKR-KSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQEELPLELEWEVWP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128294 for 2013 contacts (-63.7/contact) +
2D Compatibility (PS) -25510 + (NN) -2572 + (LL) 1544
1D Compatibility (HY) -16400 + (ID) 4450
Total energy: -175682.0 ( -87.27 by residue)
QMean score : 0.368
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