Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITLDGRLVAHKHINVNKGELAHRHSTLAGGKPVLCPVLKVEKGKITYIGNNSEHYKPALANLYNAVKN
2PCO Chain:A ((2-20))
--------------------------------------------------MWSGMWRRKLKKLRNALKK
General information:
TITO was launched using:
RESULT:
Template:
2PCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 759 for 66 contacts (11.5/contact) +
2D Compatibility (PS) -2084 + (NN) -1318 + (LL) 3168
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -975.0 ( -14.77 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_2PCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PCO-query.scw
PDB file :
Tito_Scwrl_2PCO.pdb
: