Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRIIAGKYRGRRIATGKHLAARPTMSIVREAVFNILSSKKIIYNLNILDLFCGSGSFSFEALSRGAKHAFIVDLDYYNLQLPEKTAKDLGITDSITLICCSAN-ALPKPVS---KCDIVFIDPPYYSNLVNSTLDGLANSGWLSDDALIILEVRKNEDF-QCSKNFSVILERTYGIARIIFLSLST
2FHP Chain:A ((2-177))
--RVISGEYGGRRLKALDGDNTRPTTDKVKESIFN-IGP--YFDGGMALDLYSGSGGLAIEAVSRG-DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKTVKLPETIGTLKKTRETVYGITQVTIYRQ--
General information:
TITO was launched using:
RESULT:
Template:
2FHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58130 for 1304 contacts (-44.6/contact) +
2D Compatibility (PS) -17744 + (NN) -190 + (LL) 1268
1D Compatibility (HY) -3200 + (ID) 2000
Total energy: -79996.0 ( -61.35 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_2FHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FHP-query.scw
PDB file :
Tito_Scwrl_2FHP.pdb
: