Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVCMCFKVLKTLKIGCTEKPHLLKL
2KGF Chain:A ((21-33))
------FAVIKELKTAASQ-------
General information:
TITO was launched using:
RESULT:
Template:
2KGF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 900 for 47 contacts (19.1/contact) +
2D Compatibility (PS) -1296 + (NN) -1036 + (LL) 1456
1D Compatibility (HY) -800 + (ID) 250
Total energy: -1026.0 ( -21.83 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_2KGF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KGF-query.scw
PDB file :
Tito_Scwrl_2KGF.pdb
: