Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIYMNTIKNTIYTEAIFSKDEKHRYLLKKTWDEKKPACTVITMYPHLDGVLSLDLTTVLILNQLANSERYGAVYLVNLFSNIKTPE---NLKHIKEPYDKHTDIHLMKAISESDTVILAYGAYAKRPVVVERVEQVMEMLKPHKKKVKKLINPATNEIMHPLNPKARQKWTLKA
3FN9 Chain:A ((584-650))
----------------------------------------------------------VLYLTQRRNADREKRTTAVTVYSNIGTPKVYLNGQELSGIRNGYTDVHYV-----FDNVSLADGKNILKAVV---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15082 for 337 contacts (-44.8/contact) +
2D Compatibility (PS) -6563 + (NN) 2880 + (LL) 9084
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -13231.0 ( -39.26 by residue)
QMean score : 0.028
(partial model without unconserved sides chains):
PDB file :
Tito_3FN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FN9-query.scw
PDB file :
Tito_Scwrl_3FN9.pdb
: