Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSIYEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA
2GM4 Chain:A ((3-168))---LFGYARVST-SQQSLDIQVRALKDAGVKAN----RIFTDKAS----DRKGLDLLRMKVKEG--DVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDD-SIDTSSAMGRMVVTILSAVAQAERQRILQRTNEGRQEAMAKG------VVFGRKRK-----IDRD------AVLNMWQQGLGASHISKTM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71049 for 1006 contacts (-70.6/contact) +
2D Compatibility (PS) -17090 + (NN) -3691 + (LL) 20688
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -81592.0 ( -81.11 by residue)
QMean score : 0.281

(partial model without unconserved sides chains):
PDB file : Tito_2GM4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GM4-query.scw
PDB file : Tito_Scwrl_2GM4.pdb: