Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEDLKESLKSLGWWDLFFAIPMFLLFAYLPNYNFITIFLNIVIIIFFSIGLILTTHIIIDKIKSNTK
2K9J Chain:B ((704-710))
---------------------------------------------ILLIGLA---------------
General information:
TITO was launched using:
RESULT:
Template:
2K9J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -432 for 18 contacts (-24.0/contact) +
2D Compatibility (PS) -643 + (NN) 1175 + (LL) 5708
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 4458.0 ( 247.67 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_2K9J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K9J-query.scw
PDB file :
Tito_Scwrl_2K9J.pdb
: