Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVST---DTVFKFK-DTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKA-KYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKR------NKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
3LHS Chain:A ((7-289))------------------------------------TISVKDENGTVKVPKDAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKDEIKFDRNQKVLPAVVAKAGLLA-HPNY---SYVGQFLNELGFKNALSDDVTKGLSKYLKGP--YLQLDT-EHLADLNPERMIIM-TDHAKKDSAEFKKLQEDAT----WKKLNAVKNNRV-DIVDRDVWARSRGLISSEEMAKELVE---------


General information:
TITO was launched using:
RESULT:

Template: 3LHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51940 for 2276 contacts (-22.8/contact) +
2D Compatibility (PS) -28867 + (NN) -9937 + (LL) 3288
1D Compatibility (HY) -12800 + (ID) 4950
Total energy: -105206.0 ( -46.22 by residue)
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_3LHS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LHS-query.scw
PDB file : Tito_Scwrl_3LHS.pdb: