Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVST---DTVFKFK-DTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKA-KYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKR------NKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK |
3LHS Chain:A ((7-289)) | ------------------------------------TISVKDENGTVKVPKDAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKDEIKFDRNQKVLPAVVAKAGLLA-HPNY---SYVGQFLNELGFKNALSDDVTKGLSKYLKGP--YLQLDT-EHLADLNPERMIIM-TDHAKKDSAEFKKLQEDAT----WKKLNAVKNNRV-DIVDRDVWARSRGLISSEEMAKELVE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51940 for 2276 contacts (-22.8/contact) +
2D Compatibility (PS) -28867 + (NN) -9937 + (LL) 3288
1D Compatibility (HY) -12800 + (ID) 4950
Total energy: -105206.0 ( -46.22 by residue)
QMean score : 0.471
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