Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQTILNRVKTRVMHQLVSSLIYENIVVYKASYQDGVGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERVVGDEADTTTDYTQLLREAVFTFPKNDEKLEQFIVELLQTELKDTQSMQYRESNPPATPETFNDYEFYAMEGHQYHPSYKSRLGFTLSDNLKFGPDFVPNVKLQWLAIDKDKVETTVSRNVVVNEMLRQQVGDKTYEHFVQQIEASGKHVNDVEMIPVHPWQFEHVIQVDLAEERLNGTVLW-LGESDELYHPQQSIRTMSPIDTTKYYLKVPISITNTSTKRVLAPHTIENAAQITDWLKQIQQQDMYLKDELKTVFLGEVLGQSYLNTQLSPYKQTQVYG-----ALGVIWRENIYHMLIDEEDAIPFNALYASDKDGLPFIEKWIKQYGSEA--------WTKQFLAVAIRPMIHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKREHLSEAASHLTLKPMPEAHKKVNSNSFIETDDERLVRDFLHDAFFFINIAEIILFIEKQYGIDEQRQWQWVKDIIEAYQEAFPELNNYQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTNPLGVGGINDATTISET |
2X3K Chain:A ((169-475)) | ---------------------------------------------------------------------------------------------------------------------------------------------GHPSHPAPKARLWPAHLGQEQWAPEFQARAALHQFEVPVDGL------HIGANGLTPQQVLDG----FADQQPASPGHA----IICMHPVQAQLFMQDARVQQLLRDNVIRDLGQSGRVASPTASIRTWF-IDDHDYFIKGSLNVRITNCVRKNAWYELESTVLIDRLFRQ-------LLDQHADTLGGLVAAAEPGVVSWSPAAAGELDSHWFREQTGGILREN-FCRRTGAERSIMAGTLFARGVDLQPMIQTFLRTHYGEALDDNALLYWFDDYQTRLLRPVLSLFFNHGVVMEPHLQNSVLVHQQGRPQQVLLRDF-EGVKL------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110126 for 2175 contacts (-50.6/contact) +
2D Compatibility (PS) -30787 + (NN) -10090 + (LL) 23032
1D Compatibility (HY) -9600 + (ID) 4200
Total energy: -141771.0 ( -65.18 by residue)
QMean score : 0.329
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