Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIVQPVIEQLKAQSHPVCHYIYDLVGLEHHLQHITSSLPSNCQMY-YAMKANSERTILDTISQYVEGFEVASQGEIAKGL--AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRVNLAGPFPNATLH----MAGRPTQFGISEDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNLHVDVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEMEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISHHDFLSHPHPEFIYLTQTKEDE |
| 3C5Q Chain:A ((29-386)) | -------------QTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGEIQRALKAGIKP-YRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRIN---PNIDAKTHPYLSTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALG-IDLRFFDVGGGIGVSYENEETIKLYDYAQGILNAL----QGLDLTIICEPGRSIVAESGELITQVLYEKK--NKRFVIVDAGMNDFLRPSLYHAKHAIRVI----TPS---EIS----PCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQ-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175595 for 2927 contacts (-60.0/contact) +
2D Compatibility (PS) -36944 + (NN) -13472 + (LL) 4860
1D Compatibility (HY) -16800 + (ID) 4950
Total energy: -242901.0 ( -82.99 by residue)
QMean score : 0.466
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