Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFYNILGVLILVMLSTDALDCDIITHLRTSLINFLPIQSLLSALKNPYC
2R2O Chain:A ((45-60))
----------------VKVLDCDTISQAKEKM------------------
General information:
TITO was launched using:
RESULT:
Template:
2R2O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1271 for 67 contacts (-19.0/contact) +
2D Compatibility (PS) -1687 + (NN) -729 + (LL) 3288
1D Compatibility (HY) -800 + (ID) 250
Total energy: -1449.0 ( -21.63 by residue)
QMean score : -0.348
(partial model without unconserved sides chains):
PDB file :
Tito_2R2O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R2O-query.scw
PDB file :
Tito_Scwrl_2R2O.pdb
: