Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQAQYTELEKTLPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQ---GHMQSSNHQMMSPKANMH--SSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRSTNK |
| 1IQC Chain:A ((31-118)) | -------------------------------------------------------------------------------------------------------------------------LSKSG-FISCN-SCHNLSMGGTDNITTSIGHKWQQGPINAPTVLNSSMNLAQFWDGRAKDLKEQAAGPIANPKEMASTHEIAEKVVASMP----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 44239 for 473 contacts (93.5/contact) +
2D Compatibility (PS) -8626 + (NN) -2746 + (LL) 10216
1D Compatibility (HY) -1200 + (ID) 1150
Total energy: 40733.0 ( 86.12 by residue)
QMean score : -0.070
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