Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPG-HFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV
3UAZ Chain:A ((11-229))
-------------EIAESILLPGDPLRAKYIAETFLEDVTCYNNVRGMLGFTGTYKGKRVSVQGTGMGVPSISIYVNELIQSYGVKNLIRVGTCGAIQKDVKVRDVIIAMTACTDSN-MNRLTFPGFDFAPAANFDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAAKYGVNALSVLTVSNHIFTGEETTSEERQTTFNEMIEIAL---
General information:
TITO was launched using:
RESULT:
Template:
3UAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157974 for 1875 contacts (-84.3/contact) +
2D Compatibility (PS) -23643 + (NN) -5897 + (LL) 1004
1D Compatibility (HY) -25600 + (ID) 6050
Total energy: -218160.0 ( -116.35 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_3UAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UAZ-query.scw
PDB file :
Tito_Scwrl_3UAZ.pdb
: