Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKYAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHTVKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
1MZH Chain:A ((6-211))
----KYIDNAALKPHLSEKEIEEFVLKSEELGIYAVCVNPYHVKLASS--IAKKVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSSGISIAE--------
General information:
TITO was launched using:
RESULT:
Template:
1MZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93498 for 1809 contacts (-51.7/contact) +
2D Compatibility (PS) -22895 + (NN) -8256 + (LL) 948
1D Compatibility (HY) -18000 + (ID) 4500
Total energy: -146201.0 ( -80.82 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1MZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZH-query.scw
PDB file :
Tito_Scwrl_1MZH.pdb
: