Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLEIPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFGDLMIGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIRMAIVSTVLGSIVSIPIALLCASNIVHQKWISIPSRFILNIVRTIP---DLLLAAIFVAVFGIGQIP----GILALFILTICIIGKLLYESLETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGLVGAGGIGLFYDQTLGLFQYPKTATIILFTLVIVVVIDYISTKVRAHLA
4YMW Chain:D ((22-167))-----------------------------------------------------------------------------TLKLTFLAVTIGVLMGLFIALMKMSSI---KPIKLVASSYIEVIRGTPLLVQLLLIYNGLMQFGM-NIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIG----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123701 for 945 contacts (-130.9/contact) +
2D Compatibility (PS) -14315 + (NN) 2761 + (LL) 10504
1D Compatibility (HY) -11200 + (ID) 1850
Total energy: -137801.0 ( -145.82 by residue)
QMean score : 0.290

(partial model without unconserved sides chains):
PDB file : Tito_4YMW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMW-query.scw
PDB file : Tito_Scwrl_4YMW.pdb: