Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKVFIMDSVKTIIGTLLIALGLQFLAYPIINQRVGNEAFGSILTIYTIITITSVVLGNTLNNIRLINMNLYKSNHYYWKFVSILLISILIESIALIIVFLYFFNLNTIDIIFLILLNILMCLRIYLNVFFRMTLKYNQILYIALIQFLGLLIGLFLYYLIQNWIVCFITSELFATIYTLVKLRGLTIGEYQSEDNNVVKDYVMLLSTNSLNNLNLYLDRLILLPIIGGTAVTISFLSTFIGKMLATFLYPINNVVLSYISVNESDNI----KKQYLKTNLFAIAALCLVMIICYPITLIIVSLLY--NIDSSLYSKFIILGNIGVLFNAVSIMIQTLNTKHASITLQANYMTLHTITFIFITILMTI--AFGLNGFFWTTLFSNIIKYVILNIIGLKSKFINKKDVD |
| 3W4T Chain:A ((13-217)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGDPKKAIVRLSIAMMIGMSVQTLYNLADGIWVSG-LGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGADNVAVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVELAIEYARVLLAGAFIIVFNNVGNGILRGEGDANRAMLAMVLGSGLNIVLDPIFIYTLGFGVVGAAYATLLSMVVTSLF----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155630 for 1453 contacts (-107.1/contact) +
2D Compatibility (PS) -19503 + (NN) -4424 + (LL) 21428
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -163579.0 ( -112.58 by residue)
QMean score : 0.231
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