Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDRFYNWLINQKIYKEYV--ENFYL----HRGYTLQQKIKILISLYIVI-GFSIYMVDVLAVRVGLIIMVIIQTAVLFTFVKTLPKSNHKIEE
4LWL Chain:A ((118-184))
---------------------------------------------------EKIYTEIVPLENFYLAEGYHQKYYLQNTTKLYQTLKAIYGGFGNLVRSTLAARMNGYIAGNLSIASL----------------
General information:
TITO was launched using:
RESULT:
Template:
4LWL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45734 for 312 contacts (-146.6/contact) +
2D Compatibility (PS) -5877 + (NN) 2594 + (LL) 6008
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -48209.0 ( -154.52 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_4LWL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LWL-query.scw
PDB file :
Tito_Scwrl_4LWL.pdb
: