Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENLTHGYFIVEANDEAEAKQFLTEADISIQLVKEVR--LVGKDLDEVKNGDAHVDYLVTWNIPEGITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGIEKL |
2AYS Chain:A ((89-140)) | ---------------------------------------------------------------TEGYLAVAVVKKANEGLTWNSLKDKKSCHTAVDRTAGWNIPMGLIVNQ------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4286 for 200 contacts (-21.4/contact) +
2D Compatibility (PS) -4446 + (NN) 4944 + (LL) 10380
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 3842.0 ( 19.21 by residue)
QMean score : 0.051
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