Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSTTLKVRLISNFLQLIITTAFIPFIALYLTDM--LSQSIVGIYLVGLVVLKFPLSIISGYLIEIFPKKLLVLIY---QATMVIMLVFMGVFGSHQLWQIIGFCVAYAIF----TIVWGLQFPVMDTLIMDAITEDVEHYIYKISYWMTNLSVAIGALLGGLMYGYSMLLLFLIAACIFLIVLFILYIWLPQDRNQVKQSDDKRHASRYQKLQIMNIFRSYKLVLKDRNYMLLISGFSIIMMGEFSISSYIAIRLKDQFETISIGSYDITGAKMLAILLMINTVVVILLTYSISKVVLKIDFKKALITGLLIYIVGYSGLTYLNQFGLLVVFMIIATVGEIIYSPIVSEQRFKIIPKAKRGTYSAVN-ALGIHFSETLARLGIVLGVFLTSLQMGLYMFIVLTIGASMLVAGVFGGQKQVNTN |
| 2CFQ Chain:A ((6-387)) | ----NTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPL----LQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR--RSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILA-VLLFFAKTDAPSSATVANA----VGANH-SAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATG---E---QGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVL--AGNMYESIGFQGAYLVLGL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -411585 for 3091 contacts (-133.2/contact) +
2D Compatibility (PS) -36458 + (NN) 5997 + (LL) 3268
1D Compatibility (HY) -24800 + (ID) 2300
Total energy: -465878.0 ( -150.72 by residue)
QMean score : 0.246
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