Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLITYQIILFFIISLSYYLTLNHYMAVTVGNFTSIFGMFAAILFMYYYLLYKSPEYNQRKRFKHFIHITNLIIIAFSTFVLVHLALKLFFSI
3WXF Chain:A ((298-308))
----------------------------------------------AYMCMYQSPTM------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WXF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 144 for 23 contacts (6.3/contact) +
2D Compatibility (PS) -1203 + (NN) -1017 + (LL) 9368
1D Compatibility (HY) -2000 + (ID) 200
Total energy: 5092.0 ( 221.39 by residue)
QMean score : -0.009
(partial model without unconserved sides chains):
PDB file :
Tito_3WXF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WXF-query.scw
PDB file :
Tito_Scwrl_3WXF.pdb
: