Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGCLVYYLLNIDLGKMIVAQDLNLQEIFFHNLIYFFSAIFGFLTLGLLNIGMLLINSGMLGFFIAHGIYSNQLKSILLVLAPHAIFEILALLIASTFSLGFLSYLYQRMVKKNKIKNKMFHNFVTTIITVIVLTIIASLLEVYVTIN
2KWZ Chain:A ((4-33))
-----------------------------------------------------------------------AVILLTCAIHPELIFTITKILLAILGPLMV----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12257 for 118 contacts (-103.9/contact) +
2D Compatibility (PS) -3220 + (NN) -1833 + (LL) 11016
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -9844.0 ( -83.42 by residue)
QMean score : -0.120
(partial model without unconserved sides chains):
PDB file :
Tito_2KWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KWZ-query.scw
PDB file :
Tito_Scwrl_2KWZ.pdb
: