Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASIPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIHNKPF-PEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQMVQK-DHKLVMLFGDNLLDFTDPKEATAES-REALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK |
| 3OCZ Chain:A ((16-254)) | ----------------------------------------------------LQQQAVLGLNWMQDSGEYKALAYQAYNAAKVAFDHAKVAKG--KKKAVVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLK-KDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANYGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16249 for 1785 contacts (9.1/contact) +
2D Compatibility (PS) -25554 + (NN) -15904 + (LL) 4160
1D Compatibility (HY) -15600 + (ID) 4050
Total energy: -40699.0 ( -22.80 by residue)
QMean score : 0.443
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