Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ
4L9T Chain:A ((1-139))
MEFTYSYLFRMISHEMKQKADQKLEQLDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ
General information:
TITO was launched using:
RESULT:
Template:
4L9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42857 for 848 contacts (-50.5/contact) +
2D Compatibility (PS) -14744 + (NN) -5823 + (LL) 0
1D Compatibility (HY) -18000 + (ID) 6900
Total energy: -88324.0 ( -104.16 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_4L9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L9T-query.scw
PDB file :
Tito_Scwrl_4L9T.pdb
: