Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVVNLIMTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKY--DLKPSIISNSIKQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI
2O2R Chain:A ((327-371))
-------------------------RLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLR------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2O2R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6848 for 165 contacts (41.5/contact) +
2D Compatibility (PS) -4631 + (NN) -2974 + (LL) 6080
1D Compatibility (HY) -3200 + (ID) 600
Total energy: 1523.0 ( 9.23 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_2O2R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O2R-query.scw
PDB file :
Tito_Scwrl_2O2R.pdb
: