Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITYDLIGNTPLVLLEHYSDD---KVKIYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVRAGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGAQ----LAARSYAEKYGAVYMNQFESEHNPDTYFHTLGPELTSALQQ----IDYFVAGIGSGGTFTGTARYLKQHHVQC--YAVEPEGSV------LNGGPAHAHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSEGT-IVVVFPDG---------SDRYMSKQIFNYEENDYE |
| 4COO Chain:A ((106-429)) | ------IGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEI---LQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQELQEGQRCVVILPDSVRNYMTKFLSDRWMLQKGFLKEEDLTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4COO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69591 for 2573 contacts (-27.0/contact) +
2D Compatibility (PS) -31945 + (NN) -9786 + (LL) 824
1D Compatibility (HY) -21600 + (ID) 5800
Total energy: -137898.0 ( -53.59 by residue)
QMean score : ?
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