Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPVTTSRYQGGAHRG
1DJ2 Chain:A ((48-58))
-----VARCQGGANAG
General information:
TITO was launched using:
RESULT:
Template:
1DJ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 854 for 26 contacts (32.8/contact) +
2D Compatibility (PS) -1238 + (NN) -717 + (LL) 284
1D Compatibility (HY) -400 + (ID) 300
Total energy: -1517.0 ( -58.35 by residue)
QMean score : 0.670
(partial model without unconserved sides chains):
PDB file :
Tito_1DJ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DJ2-query.scw
PDB file :
Tito_Scwrl_1DJ2.pdb
: