Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIIYFSFTGNVRRFIKRTELENTLEITAENCMEPVHEPFIIVTGTIGFGEVPEPVQSFLEVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFELHGKNKDVIEFKNKVGNFNENHGREKVQSY
4BMP Chain:B ((1-113))
MLVAYDSMTGNVKRFIHKLNMP-AVQIDEDLVID---EDFILITYTTGFGNVPERVLDFLERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNNDVEYFKERV---------------
General information:
TITO was launched using:
RESULT:
Template:
4BMP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70645 for 898 contacts (-78.7/contact) +
2D Compatibility (PS) -11777 + (NN) -1356 + (LL) 356
1D Compatibility (HY) -10800 + (ID) 2700
Total energy: -96922.0 ( -107.93 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_4BMP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BMP-query.scw
PDB file :
Tito_Scwrl_4BMP.pdb
: