Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
3STA Chain:V ((4-192))
---IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVP---
General information:
TITO was launched using:
RESULT:
Template:
3STA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120968 for 1412 contacts (-85.7/contact) +
2D Compatibility (PS) -20477 + (NN) -7888 + (LL) 524
1D Compatibility (HY) -25200 + (ID) 9450
Total energy: -183459.0 ( -129.93 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_3STA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3STA-query.scw
PDB file :
Tito_Scwrl_3STA.pdb
: