Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVT-VDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIE-WQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDT-MDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
4GFS Chain:A ((36-251))
---------------------EALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKA---TVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKASAPGQISVADLRTVLTI-
General information:
TITO was launched using:
RESULT:
Template:
4GFS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116474 for 1706 contacts (-68.3/contact) +
2D Compatibility (PS) -22895 + (NN) -11404 + (LL) 2856
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -163617.0 ( -95.91 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_4GFS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GFS-query.scw
PDB file :
Tito_Scwrl_4GFS.pdb
: