Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWNKNRLTQMLSIEYPIIQAGMAGSTTPKLVASVSNSGGLGTIGAGYFNTQQLEDEIDYVRQLTSNSFGVNVFVPSQQSYTSSQIENMNAWLKPYRRALHLEEPVVKIIEEQQFKCHIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVSIPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETDTVVTKAFSGKLARGINNRFIEEMSQYEGDIPDYPIQNELTSSIRKAAANIGDKELTHMWSGQSPRLAT-THPANTIMSNIINQINQIMQYK |
3BO9 Chain:A ((16-318)) | ---RTRVTDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIIL-------------VSPWA----------DDLVKV-------C-----IEEKVPVVTFGAGNPTKYIRE-LKENGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHIGE----------VTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDVHPVYKEKIVKASIRDTVVTGAKLGHPARVLRTPFARKIQEMEFENPMQA-EEMLVGSLRRAVVE-GDLERGSFMVGQSAGLIDEIKPVKQIIEDILKEFKETVE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BO9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170171 for 2857 contacts (-59.6/contact) +
2D Compatibility (PS) -32456 + (NN) -9201 + (LL) 4144
1D Compatibility (HY) -19600 + (ID) 6100
Total energy: -233384.0 ( -81.69 by residue)
QMean score : 0.452
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