Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEF--SLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
2FU0 Chain:A ((9-158))
------------------IIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHLNHSKPF-MVSMANCGPNTNGSQFFITT---VP-------------------------CPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKI--
General information:
TITO was launched using:
RESULT:
Template:
2FU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70632 for 1159 contacts (-60.9/contact) +
2D Compatibility (PS) -15644 + (NN) -5910 + (LL) 2464
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -106372.0 ( -91.78 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_2FU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FU0-query.scw
PDB file :
Tito_Scwrl_2FU0.pdb
: