Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN
1L8Y Chain:A ((54-67))
-------KKAAEDQKRYEREL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1L8Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2936 for 50 contacts (58.7/contact) +
2D Compatibility (PS) -1642 + (NN) -1439 + (LL) 1432
1D Compatibility (HY) -800 + (ID) 400
Total energy: 87.0 ( 1.74 by residue)
QMean score : 0.674
(partial model without unconserved sides chains):
PDB file :
Tito_1L8Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L8Y-query.scw
PDB file :
Tito_Scwrl_1L8Y.pdb
: