Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKEGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK
1O6B Chain:A ((3-159))
---SIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSSKKPLFSVEERCELLREVTKDIPNITVETSQGLLIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYDGSVSEFVPPEVELALQQKFR
General information:
TITO was launched using:
RESULT:
Template:
1O6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105434 for 1218 contacts (-86.6/contact) +
2D Compatibility (PS) -17152 + (NN) -6939 + (LL) 356
1D Compatibility (HY) -19200 + (ID) 4500
Total energy: -152869.0 ( -125.51 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1O6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O6B-query.scw
PDB file :
Tito_Scwrl_1O6B.pdb
: