Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVG------KPTSYKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVST----IKDEMQPFYKQLNMKGYFYDF----DSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVI---------KVKDRQYISSNTENLLNINPD-IILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK |
| 3LI2 Chain:A ((25-263)) | ----------------------------------RIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKL---INKYKDEI-----KFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHAKKDSAE--FKK-LQEDATWKKLNAVKNNRV-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -64558 for 1559 contacts (-41.4/contact) +
2D Compatibility (PS) -22832 + (NN) -13422 + (LL) 5900
1D Compatibility (HY) -14400 + (ID) 3150
Total energy: -112462.0 ( -72.14 by residue)
QMean score : 0.409
|
|
|