Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFHHISVMLNETIDYLNVKENGVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAKEVLKD-HLHKVTFVHSNFRELTQILKDLNIEKVDGIYYDLGVSSPQLDIPERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHREQQPITTTLELVDIIKEGIPAKARRKGGHPAKRVFQALRIAVNDELSAFEDSIEQAIELVKVDGRISVITFHSLEDRLCKQVFQEYEKGPEVPRGLPVIPEAYTPKLKRVNRKPITATEEDLDDNNRARSAKLRVAEILK |
4PON Chain:A ((22-128)) | ---------------MAAGEGDIVIDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGEAYQARTTLFHKSHDKIAKSLPPETHGKVAAAVFNLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58646 for 636 contacts (-92.2/contact) +
2D Compatibility (PS) -9413 + (NN) -3091 + (LL) 17492
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -58308.0 ( -91.68 by residue)
QMean score : 0.568
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