Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHLLSMEHLSTDQIYKLIQKASQFKSGERQLPNFEGKYVANLFF-ENSTRTKCSFEMAELKLGLKTISFETSTSSVSKGESLYDTCKTLESIGCD--LLVIRHPFNNYYEKLANINIPIANAGDGSGQHPTQSLLDLMTIYEEYGYFEGLNVLICGDIKNSRVARSNYHSLKALGANVMFNSPNAWIDDSLEAPYVNI-DDV---IETVDIVMLLRIQHERHGLAEETRFAADDYHQKHGLNEVRYNKLQEHAIVMHPAPVNRGVEIQSDLVEASKSRIFKQMENGVYLRMAVIDELLK |
3D6N Chain:B ((1-285)) | MRSLISSLDLTREEVEEILKYAKEFKEGKEETI----KASAVLFFSEPSTRTRLSFEKAARELGIETYLVSGSESSTVKGESFFDTLKTFEGLGFDYVVFRVPFVFFPYKEIVKSLNLRLVNAGDGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIWLRLQKERQ--KENYIPSESSYFKQFGLTKERFEKVK---LYMHPGPVNRNVDIDHELVYTEKSLIQEQVKNGIPVRKAI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145282 for 2281 contacts (-63.7/contact) +
2D Compatibility (PS) -29945 + (NN) -11463 + (LL) 928
1D Compatibility (HY) -23600 + (ID) 5650
Total energy: -215012.0 ( -94.26 by residue)
QMean score : 0.483
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