Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNKDDVLKQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDML-KKHQKQAVNFQNYGKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHSD
2J7W Chain:A ((281-360))
LHNEEKIIQQMDPEHRQLANAIFKLTYQNKVVKVQRPTPTGTVMDIISRKDQRGSGQVGTYGLNTFTNMEAQLVRQMEGE------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2J7W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 30811 for 385 contacts (80.0/contact) +
2D Compatibility (PS) -7832 + (NN) 2552 + (LL) 3240
1D Compatibility (HY) -2000 + (ID) 800
Total energy: 25971.0 ( 67.46 by residue)
QMean score : 0.250
(partial model without unconserved sides chains):
PDB file :
Tito_2J7W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J7W-query.scw
PDB file :
Tito_Scwrl_2J7W.pdb
: