Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQISNINKSFNKRCVLKNISFDIEQGKCIALIGKNGAGKSTLI-------DILIGNVNANSGEIFDKDKLLQSENRSI--MFQK-TMFPDQLKVIEIINLYQSFYENPLPLE-------EIIELTKFDSSQLNQFVNKLSGGQQRLLDFVLSLIGQPQLILLDEPTSTMDIEIREYFWSIIENLKEDNRTILYTSHYIEEVERMSDKIILIENGEIILNDSTSHIRTNQQSQITLSDEYIRKLKLDKDDLVIQKNHNGTIKIITSNVNDTILYLQQLHINLDDIEIQKVSIVDSYFNNKKQRGSNYDTKLLENRI |
| 4U00 Chain:A ((4-236)) | IIRIRNLHKWFGPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSVKD-DRALREIRREVGMVFQQFNLFP-HMTVLENVTLAPMRVRR-WPREKAEKKALELLERVGI-LDQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRS------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125082 for 1671 contacts (-74.9/contact) +
2D Compatibility (PS) -23475 + (NN) -9658 + (LL) 5092
1D Compatibility (HY) -15200 + (ID) 3200
Total energy: -171523.0 ( -102.65 by residue)
QMean score : 0.442
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