Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLFIPYIMGNKDLIENATLLSENGADIIEIGVPFSDPVADGPVIMEAGQQAIKQGITIDYIFNQLEKHGDQIKCNYVLMTYYNIICHYGEQAFFEKCRDTGVYGLIIPDLPYELSQRLKQQFSHYGVKIISLVAMTTDDKRIKDIVSHAEGFIYTVTMNATTGQNGAFHPELKRKIESIKAIANVPVVAGFGIRTPQHVADIKEVADGIVIGSEIVKRFKSNTREEIIRYLQSIQQTLNN
1UJP Chain:A ((43-267))
--------------------------ADLLEIGLPYSD----GPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSV------------EVKDLVRRIKARTALPVAVGFGV-SGKATAAQAAVADGVVVGSALVRALEEG--RSLAPLLQEIRQGLQR
General information:
TITO was launched using:
RESULT:
Template:
1UJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162353 for 1538 contacts (-105.6/contact) +
2D Compatibility (PS) -21829 + (NN) -9779 + (LL) 2128
1D Compatibility (HY) -17200 + (ID) 3450
Total energy: -212483.0 ( -138.16 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1UJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UJP-query.scw
PDB file :
Tito_Scwrl_1UJP.pdb
: