Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLRLIDITGFSFPSGHA-MGSTAY---FGSGIYLLNRLNQGNSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN |
4ZHJ Chain:A ((446-521)) | ---------------------------------------------------------------------------------------ALQDRLEAIAQRAMKWANLRKKPKLDKKVAITVFSFPPDKGNVGTAAYLDVFGS-IYEVMKGLQGN------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6943 for 217 contacts (-32.0/contact) +
2D Compatibility (PS) -6321 + (NN) -2284 + (LL) 14032
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -5616.0 ( -25.88 by residue)
QMean score : -0.079
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