Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLGKMSDLDQILNLVEEA---KELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPFYAYYKNLKE
4MBU Chain:A ((4-142))
MIRCAKKEDLNAILAIYNDAIINTTAVYTYKPQTIDERIAWFETKQRN--HEPIFVFEENGSVLGFATFGSFRP-------WPAYQYTIEHSIYVDASARGKGIASQLLQRLIVEAKAKGYRTLVAGIDASNEASIKLHQKFNFKHAG------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62259 for 917 contacts (-67.9/contact) +
2D Compatibility (PS) -14608 + (NN) -3317 + (LL) 1952
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -85182.0 ( -92.89 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_4MBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MBU-query.scw
PDB file :
Tito_Scwrl_4MBU.pdb
: