Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIISISETPNHNTMKITLSESREGMTSDTYTKV-DDSQPAFIND-------ILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE
2LTL Chain:A ((24-101))
--------TPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVESLMIGDDFLTINKDRMVHWNSIKPEI-----
General information:
TITO was launched using:
RESULT:
Template:
2LTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13431 for 401 contacts (-33.5/contact) +
2D Compatibility (PS) -7611 + (NN) -3533 + (LL) 1608
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -28267.0 ( -70.49 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_2LTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LTL-query.scw
PDB file :
Tito_Scwrl_2LTL.pdb
: