Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKAINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYRALTYKYL--KLNKTEDFAKLVDQTTLDLTYKADKGQC-VILDNEDVTDFLRNNDVTQHVSYVASKEPVRSFAVKKQKELAAEKGIVMDGRDIGTVVLPDADLKVYMIASVEERAERRYKDNQLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGKSIEEVTDEILAMVSQIK
4E22 Chain:A ((30-245))
-----ITVDGPSGAGKGTLCKALAESLNWRLLDSGAIYRVLALAALHHQVDISTEEALVPLAAHLDVRFVSQNGQLQVILEGEDVSNEIRTETVGNTASQAAAFPRVREALLRRQRAFREAPGLIADGRDMGTIVFPDAPVKIFLDASSQERAHRRMLQLQERGFNVNFERLLAEIQ------------PLVPAADALVLDSTSMSIEQVIEQALAYAQRI-
General information:
TITO was launched using:
RESULT:
Template:
4E22.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84548 for 1569 contacts (-53.9/contact) +
2D Compatibility (PS) -21388 + (NN) -6576 + (LL) 1416
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -129396.0 ( -82.47 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_4E22.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E22-query.scw
PDB file :
Tito_Scwrl_4E22.pdb
: