Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKVIGLTGGIASGKSTVSELLSVFGFKVVDADKAAREAVKKGSKGLAQVREVFGDEAIDENGEMNRRYMGDLVFNHPEKRLELNAIIHPIVRDIMEEEKQEYLKQGYNVIMDIPLLFENELENTVDEVWVVYTSESIQMDRLMQRNNLSLEDAKARVYSQISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEGYIEKPNYGEED
4TTQ Chain:A ((19-203))
----VGLTGNIASGKSTVAEFFSELGINVIYADKIAKELTSKNTPCYQDIISHFGSSVVLNNGELDRKRIRDIIFSNSNERLWLESLLHPVIRKKIEE--QLIVCTSPYCLIEIPLLFNKHHYPYLQKVLLVIAPLESQLDRIVKRDHCTKKQALAILATQPNLEQRLEAADDVLINESGLSELKAKVNKL----------------
General information:
TITO was launched using:
RESULT:
Template:
4TTQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56780 for 1322 contacts (-43.0/contact) +
2D Compatibility (PS) -20371 + (NN) -7095 + (LL) 1104
1D Compatibility (HY) -15200 + (ID) 3050
Total energy: -101392.0 ( -76.70 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_4TTQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TTQ-query.scw
PDB file :
Tito_Scwrl_4TTQ.pdb
: