Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEHVKRGIEPYVINQKIEHV-IFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVAS--VASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYKQP--VCKVCGSQIETKIIATRNSHYCPVCQK |
1L2D Chain:A ((2-274)) | -PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDS----------EAFAARMIGQTVRGLERRGKFLKFLLDRD----ALISHLRMEGRYAVASALEPL-----EPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRS--VKALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGS--------------FQHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1L2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121362 for 2021 contacts (-60.1/contact) +
2D Compatibility (PS) -26757 + (NN) -5566 + (LL) 2096
1D Compatibility (HY) -19600 + (ID) 4650
Total energy: -175839.0 ( -87.01 by residue)
QMean score : 0.442
|
|
|