Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNLIIDAGIG----------NGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVPGIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN |
3DHB Chain:A ((35-192)) | -------------------------------------------LNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILP-KMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHA------GGNGAFTNTPIIVQRTEYEAAL-----HREEYMKECILPHLNYKII-EGDYEVVPGVQLLYTPGHSPGHQSLFIETEQSGSVLL---------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DHB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -57199 for 1088 contacts (-52.6/contact) +
2D Compatibility (PS) -16082 + (NN) -5009 + (LL) 7368
1D Compatibility (HY) -12400 + (ID) 2300
Total energy: -85622.0 ( -78.70 by residue)
QMean score : 0.521
|
|
|